To overcome box-shaped ROIs and enable brain-structure-specific comparison of metabolite levels across patient groups, a fully-automated brain-structure-specific metabolite quantification approach was developed and applied to the analysis of MEGA-LASER 3D MRSI data. Structure-specific GABA, Glx, NAA and tCho levels and their hemispheric variation in healthy volunteers was studied. The four metabolite levels varied significantly across different brain regions, but did not differ between left and right hemispheres. Correlations between the left and right hemisphere metabolite levels were observed only for some structures.
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