A Semi-Classical Signal Analysis (SCSA) method with soft thresholding is proposed for MRSI denoising. The SCSA takes advantage of the pulse-shaped MRS spectrum to decompose both real and imaginary parts, into localized basis given by squared eigenfunctions of the Schrödinger operator. An optimization-based soft-threshold is provided to find optimal semi-classical parameters, for both the real and imaginary parts of the MRS signal. The optimal SCSA parameters discard the eigenfunctions representing noise from the noisy
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